Troubleshooting and Problems

Hi,

When creating a define.xml from an excel workbook, Pinnacle 21 Community hangs. Is this due to metadata inconsistencies or some other issue? If metadata inconsistencies, is there a log to help troubleshoot?

EDIT: I worked backwards removing all values in the sheets until I basically got down to the original skeletal define.xlsx that P21 generates from the *.xpt TD and it still hung when trying to create the define.xml.

Here's my current command:

java -jar p21-client-1.0.3.jar --engine.version="FDA 2010.1" --standard=sdtm --standard.version=3.3 --source.sdtm="/Users/server01/Documents/test_17/sas_files/*.xpt" --source.define="/Users/server01/Documents/Pinnacle 21 Community/Define.xml" --cdisc.ct.sdtm.version=2021-03-26 --meddra.version=""  --unii.version=2021-2-12 --ndf-rt.version=2021-04-05 --report="/Users/server01/Documents/Pinnacle 21 Community/reports/s101-sdtm.xlsx"

PWD:

The downloads page indicates that the source code can be found on Bitbucket.  Unfortunately, I don't see any source code for Community v3.1.0 - only v3.0.2 and earlier.  Would you provide a link to the Community v3.1.0 source code or update the Bitbucket repository with the latest changes?  Thanks!

Currently the "Message" column information of the define.xml validation report is populated with only Chinese in the "Details" tab

This also occurs in the "Rules tab".  This appears to be linked to the new engine, FDA 2010.1.

This issue pertains to the Community validator. An example validation report of a define.xml is provided.  

Following updates on 07-April-2021, there is no longer an option for a non-legacy FDA engine that can be used.  Is there an updated engine that is missing as the previous FDA 1907.2 now indicates 'Legacy' and results in errors within the validation reports.

Hi,

UNII versions 2020-10-19 and 2020-11-16 are unavailable in P21 Community Version: 3.1.0.

Thank you for your support.

Regards,

Hello,

I have developed a CLI tool to validate SDTM and ADaM datasets from SAS. The tool works about 50% of the time, but often fails with warnings output to the java log. However, the command / java code is identical with each case. What could be causing this fail sometimes with "Failed to process encrypted file" and "Failed to process eTag file" warnings?

NOTE: internal paths below were replaced with "<path>"

Goodmorning,

Thank you again for your precious work.

I m trying to validate tmy define for SEND using PINNACLE CLI fllowing instructions present in PharmaSUG-2018-DS20.pdf for SDTM(Example 6).

This is my code:

java -jar p21-client-1.0.3.jar  --standard=send --standard.version=3.1 --source.define="******\define.xml" --cdisc.ct.send.version=2020-09-25 --report="******\define-report.xlsx"

I get this eerror:

Goodmorning,

Thank you for your precious work.

I m trying to create the define template for SEND using PINNACLE CLI fllowing instructions present in PharmaSUG-2018-DS20.pdf for SDTM(Example 4).

This is my code:

java -jar p21-client-1.0.3.jar --standard=send --standard.version=3.1 --source.send="******\xpt\" --output.format=define-excel --output="*******\define_original.xlsx" --cdisc.ct.send.version=2020-09-25 

I get this eerror: